PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0650s0012.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 312aa    MW: 35252.2 Da    PI: 5.4994
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0650s0012.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19107157155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          ++y+GVr+++ +g+W+AeIrdp     r  r +lg++ taeeAa  +++a+ +++g
  Kalax.0650s0012.1.p 107 KKYRGVRQRP-WGKWAAEIRDPQ----RrVRLWLGTYNTAEEAAMVYDNAAIQFRG 157
                          59********.**********93....35***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.93E-32107164No hitNo description
SuperFamilySSF541719.15E-22108165IPR016177DNA-binding domain
SMARTSM003801.0E-37108171IPR001471AP2/ERF domain
PROSITE profilePS5103224.21108165IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-30108165IPR001471AP2/ERF domain
PfamPF008471.0E-12108157IPR001471AP2/ERF domain
PRINTSPR003672.0E-10109120IPR001471AP2/ERF domain
PRINTSPR003672.0E-10131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MFNQVKYTEH KEASTVVLHY RLASPDLPKL LRISLTDSYA TDSSSDDDDQ LQRSLARRLR  60
VKKYVHEVSI KAPSGAPVEN TNETSRPSRC RKLTGKPVYQ PSRRIEKKYR GVRQRPWGKW  120
AAEIRDPQRR VRLWLGTYNT AEEAAMVYDN AAIQFRGPDA LTNFSSHPTP LQEVEFSKKF  180
DSIAATSSKD SLSPRVCSPT SVLRFQSEEA ESQLSSYAET QEEDKGKKGI SSGFTECDSF  240
LYPNDAFHLD FFPEPRVAND TSFLSQDFGE EDYLFPEPGF GYGPASSKWV LDEFFQQDIG  300
DLFGSDPLLA L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-19107164462ATERF1
2gcc_A2e-19107164462ATERF1
1gcc_A2e-19107164159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002271526.13e-69PREDICTED: ethylene-responsive transcription factor CRF2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.22e-51cytokinin response factor 2